I am going to try to answer some more questions. I spent about 2 hours watching: IMAX under the sea 3D, Thor 3D and Legends of Guardian.
1. I had AE7000 in dynamic mode (brightness with brightness set at +7), I had JVC on all defaults and 3D mode. Result: The Panasonic was substantially dimmer than the JVC. Without the glasses the brightness appeared relatively the same however with the Panasonic shutter glasses, everything was much darker than the JVC glasses.
2. JVC had basically zero crosstalk, I could not make out much ghosting or ghost image by closing one eye and testing. Panasonic, despite playing around with the parallax I could not get rid of all the ghosting and make the 3D appear as realistic as the JVC. This is just from my experience, its possible that:
1. My eyes are screwed LOL
2. The Panasonic Glasses don't fit over my glasses as well as JVC's glasses
3. I am doing something wrong, which is definitely possible, but there is only so a few things you can play around with on the Panasonic in respect to 3D.
Overall I experienced must less fatigue because JVC's 3D was so clean and easy to watch over the AE7000.
3. The blue dot issue, I did not notice this at all as I was not running at the edge of lens shift. When I was at the office, I had it running at the maximum shift (maximum vertical in the up direction).
4. I don't go into 2D because there is no point, we all know who wins that. I haven't had chance to try that softness/sharpness setting. I am sure its possible to get rid of the graininess with playing around with the settings.
5. Flickering in 2D: none existant, Flickering in 3D: JVC still has a bit of a flicker but it doesn't bother me as much. Like I said before it is like using 75HZ instead of 85HZ on a CRT monitor. It is not like 60HZ vs 85HZ, that would be terrible. 85HZ is the refresh rate you would use if you don't want any flickering on the CRT monitor. 60HZ would give you seizures. The flickering I tended to tune out once I started really watching the movie.
No Flickering on the Panasonic.
6. Screen used: EluneVision Reference Studio 100 Fixed Frame, for those who don't know it is basically like a StudioTek 100. The size is 108" 16:9.